Preview

Zhurnal Prikladnoii Spektroskopii

Advanced search

FLUORESCENCE DYNAMICS OF N-TERMINAL TRYPTOFAN-X RESIDUES IN POLYPEPTIDE: pH RESPONSE

Abstract

The influence of the second amino acid on the pH response of the genetically encoded pH indicators is studied. The second Trp has been substituted by Ala and Glu to reduce self-quenching. Compared with the previously reported Trp-Trp-Ala-Ser (WWAS), the two new tetrapeptides, Trp-Ala-Ala-Ser (WAAS) and Trp-Glu-Ala-Ser (WEAS), have higher fluorescence quantum yields, longer fluorescence lifetimes, and more sensitive pH responses. As novel genetically encoded pH indicators, the N-terminal Trp-Ala and Trp-Glu could be fused to proteins for monitoring the environmental pH values during the studies of functional proteins.

About the Authors

L. . Li
East China Normal University, State Key Laboratory of Precision Spectroscopy; School of Science, Jiangsu Provincial Research Center of Light Industrial Optoelectronic Engineering and Technology, Jiangnan University
Russian Federation


X. . Cao
East China Normal University, State Key Laboratory of Precision Spectroscopy
Russian Federation


Zh. . Zhou
East China Normal University, State Key Laboratory of Precision Spectroscopy
Russian Federation


S. . Zhang
East China Normal University, State Key Laboratory of Precision Spectroscopy; Collaborative Innovation Center of Extreme Optics, Shanxi University
Russian Federation


H. . Pan
East China Normal University, State Key Laboratory of Precision Spectroscopy
Russian Federation


J. . Chen
East China Normal University, State Key Laboratory of Precision Spectroscopy
Russian Federation


J. . Xu
East China Normal University, State Key Laboratory of Precision Spectroscopy; Collaborative Innovation Center of Extreme Optics, Shanxi University
Russian Federation


References

1. S. Ohkuma, B. Poole, Proc. Natl. Acad. Sci. USA, 75, 3327 (1978).

2. Atsushi Abiko, Satoru Masamune, Tetrahedron Lett., 37, 1081 (1996).

3. M. Schindler, S. Grabski, E. Hoff, S. M. Simon, Biochemistry, 35, 2811 (1996).

4. C. Balut, M. van de Ven, S. Despa, I. Lambrichts, M. Ameloot, P. Steels, I. Smets, Kidney Int., 73, 226 (2008).

5. J. Llopis, J. M. McCaffery, A. Miyawaki, M. G. Farquhar, R. Y. Tsien, Proc. Natl. Acad. Sci. USA, 95, 6803 (1998).

6. D. Perez-Sala, D. Collado-Escobar, F. Mollinedo, J. Biol. Chem., 270, 6235 (1995).

7. Adiba Ishaque, Mohamed Al-Rubeai, J. Immunol. Methods, 221, 43 (1998).

8. M. Miksa, H. Kornura, R. Q. Wu, K. G. Shah, P. Wang, J. Immunol. Methods, 342, 71 (2009).

9. S. Simon, D. Roy, M. Schindler, Proc. Natl. Acad. Sci. USA, 91, 1128 (1994).

10. R. A. Gottlieb, J. Nordberg, E. Skowronski, B. M. Babior, Proc. Natl. Acad. Sci. USA, 93, 654 (1996).

11. M. Lakadamyali, M. J. Rust, H. P. Babcock, X. Zhuang, Proc. Natl. Acad. Sci. USA, 100, 9280 (2003).

12. E. J. Adie, S. Kalinka, L. Smith, M. J. Francis, A. Marenghi, M. E. Cooper, M. Briggs, N. P. Michael, G. Milligan, S. Game, Biotechniques, 33, 1152 (2002).

13. Min Hee Lee, Ji Hye Han, Jae Hong Lee, Nayoung Park, Rajesh Kumar, Chulhun Kang, Jong Seung Kim, Angew. Chem. Int. Ed., 52, 6206 (2013).

14. Rui Wang, Chunwei Yu, Fabiao Yu, Lingxin Chen, Chunwei Yu, TrAC Trend. Anal. Chem., 29, 1004 (2010).

15. F. Qu, N. B. Li, H. Q. Luo, Langmuir, 29, 1199 (2013).

16. Xiaoqing Liao, Ruiyi Li, Xiaohuan Long, Zaijun Li, RSC Adv., 5, 48835 (2015).

17. Yanling Feng, Yufei Liu, Chen Su, Xinghu Ji, Zhike He, Sensor. Actuat. B: Chem., 203, 795 (2014).

18. Ranieri Bizzarri, Michela Serresi, Stefano Luin, Fabio Beltram, Anal. Bioanal. Chem., 393, 1107 (2009).

19. W. B. De Lauder, P. Wahl, Biochemistry, 9, 2750 (1970).

20. David M. Jameson, Gregorio Weber, J. Phys. Chem., 85, 953 (1981).

21. L. Li, H. Yi, M. F. Chang, X. D. Cao, Z. N. Zhou, C. F. Qin, S. J. Zhang, H. F. Pan, Y. Chen, J. H. Xu, Sci. Bull., 60, 2129 (2015).

22. Menghui Jia, Hua Yi, Mengfang Chang, Xiaodan Cao, Lei Li, Zhongneng Zhou, Haifeng Pan, Yan Chen, Sanjun Zhang, Jianhua Xu, J. Photochem. Photobiol. B: Biology, 149, 243 (2015).

23. J. H. Xu, J. R. Knutson, J. Phys. Chem. B, 113, 12084 (2009).

24. Peter Wiget, Pier Luigi Luisi, Biopolymers, 17, 167 (1978).

25. R. F. Chen, J. R. Knutson, H. Ziffer, D. Porter, Biochemistry, 30, 5184 (1991).

26. R. F. Chen, Anal. Lett., 1, 35 (1967).

27. J. R. Lakowicz, Principles of Fluorescence Spectroscopy, 3rd ed., Springer, New York (2006).


Review

For citations:


Li L., Cao X., Zhou Zh., Zhang S., Pan H., Chen J., Xu J. FLUORESCENCE DYNAMICS OF N-TERMINAL TRYPTOFAN-X RESIDUES IN POLYPEPTIDE: pH RESPONSE. Zhurnal Prikladnoii Spektroskopii. 2017;84(4):610-615. (In Russ.)

Views: 304


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 0514-7506 (Print)